Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847932.1_cds_XP_016510229.1_23089
CDS Infomation

[gene=LOC107827579] [db_xref=GeneID:107827579] [protein=uncharacterized protein LOC107827579 isoform X3] [protein_id=XP_016510229.1] [location=join(50952..51272,51356..51492,53084..53197,53282..53365,54860..54995,55290..55453,55531..55657,55742..55885,56069..56164,56516..56611,56738..56833,56960..57055,57322..58593)] [gbkey=CDS]
Sequence

ATGGTGGCTGATCAGTGGAAGAAACGTCTACGTGCTGCCAGCACTGTTGACTATTCTCAG
GAACCCCATGGATTGAAGAAGAAGAAGAAGAAGCAGGGATTAGCAAGATATAGTTTGAAG
TTAAGATCCAATGTTTCTCTGGTCTGGGATGACAAAAAAAGGTGTGTTCTTGCCAAGAAG
GAGCAAATTGGCATTTCATGGAGAGACTTGACTCCCTTTTTGGATTCTCTCTCCCACCAT
CATAGTATACTGGCTGATGTTTTTACTCTACCTCACGGAATTTTTGAATTCGAAAATTTA
AGTGAGGTCCTCTCGCACGAGGTCTGGCAGGCAAACTTGTCAGAAGATGAGAGAGGATTT
CTTACCCAATTTTTGCCGGAAGGGTCAGATCCAGATGAAATTGTCTGTAAATTGCTGGGG
CAGGAAAATTTTCACTTCGGAAATCCTTTTGTTAAGTGGGGTCAGATGATTTGTTCTGGT
AGCTTTCACCCTGATATTGTTATGCGTCAGGAACATCTTCTCAAGGCTAACAAGAAGGCG
TATTACATGGAATTACAAAATTACCATAATAATATGATTGAGAAGTTGCAGTTATGGAAG
GAAAATGTGGAGAGCTGTAAAGACTCTGAGGAAGAATTGGTGGAGAGAATATTGAGAAAG
GGCTTCACAGAAGGCACCTATGGCAGTTCACCTGATGGAGCTAAGGTGATTGGAAGGTCT
AGGAAAGGAGAAAAGCTAAACAGGCGCAATATCCAACACAGCGATGGCGCCAAATACATG
TCTTATATTAAGGTCAGTCGAGAACACTACCAACGTGTTAAGAACAGCATGAAGCATAAT
AGTAATAGCATTCAGCCCAGGTCTCTGAGCAACGTCTTAGGTGATATGGAAAATCTCCAT
GTACAGCCATTTGAATTTTATGAGGAAGAGGAACGTCAGAAGTTACATGACCACTGGCTG
CACCTGGCAAACAGAGATGTCCCTGCTGGTTTTGCAAACTGGATACAGAGACGTTCACAG
GGATTGCAAGTGAGAAGATCATTAGGTCAAGAAATGGAACAGAAACTGAAAGTCCAAATT
AAGGGGGAAGAGGAAAAGATCCCCGATGGGATCTTTGCAGAACTAACTGATACTAAAGAA
GAAGAAGAGAGAAGGAGCTCTGATGGGATCTTTGCTGAACTAACTGATAATAAAGAAGCA
GAAGTTGCACTCTCAATGGAAGTAGAGGTTGATCAGCAAGAGGGCAACGAAAAATCTGAT
GGGTTGATTGAGAAGCAGATGGAAAGCGAGATAGTAGATAATGAGCTTTCTCTACACTCG
GAGGTTGATCAGCATGAGAGCAACGAAAAATCTGATGGGTTGATCGAAAAGCAAATGGAA
AGCGAGATAGTAAATACTGAGCTTTTTCTACACTCGGAGGTTGATCAGCATGAGAGCAAC
GAAAAATCTGATGGGTTGATCGAAAAGCAAATGGAAAGCGAGATAGTAAATACTGAGCTT
TTTCTACACTCGGAGGTTGATCAGCATGAGGGCAAAGAAGAATCTGATGGATTGATCAAG
AAGCAAATGGAAAGAGAAATAGTAAATGATGAGCTTCCTCTACAGCCAGAGGATCAGGAG
GGAGGAGAATCTGCAAGCTTATGTGATAAACAGACTCCTGATAGCACAGCTAACACTGAT
TATGATGATGAATCTCTCCCTGTCTCACTCAATCAGCATCTTGATCATGTTTCACTTGTT
GAGAGCAATCAGTTAGACCACTTTAAGCTGGACTCTAACGAGAACCATATAATCCAGCAA
GCAGATGAAGTTTCTCCAACTCTATCAGAGTATCCAGAGGAAGGGTTGAATAATGTGGAT
GGTCCTGTTGATCAGGGGGATCCTCTTGCTTCTACCAGTGTTGGTTGGCCAGCAGTTAGC
ATAGCTACTTCTTATGGACGTGCCACTCCCATAAGTCATGAATATTCTTCTGTTGAGGAG
TTGTCACTTGGGCATCCTCGAGTTACTGATGAGCCAGCGGCTAGTCTTATTAATCTGGGA
GCTGTCCCTACAGAAAAGGATGCTGGGAGGGATATGTTGCCCAGAGAACCCAGTGATGTT
TCTCTTTTTGGTTCATACCCTCAGAACAGGAATGAAATATTTCAACCATTTTTTAAAGGT
CCAGATAGTTTATCTTACAATCATGAGCATAGACAGCCTCCACTGGTGTACCAACCATCA
AGCAATCTGATCGTGGAGCCAGGTCAATATTCTGGTCATTTAAGGGAGCAGCTTCATGCG
CAGTTACCATTGGAGCTAAGGCACAAGGGACTGAATGATCTCCTCATGCATCAGAACTTT
CAGGAGAATCTATACCCAGATGGAGGTCGATACTCTTTCCCTAGGCATGAGCAGTTGAAT
GTTGGCATGCAAGATTGGGCTGTCAATTCTGTTCATGTATCAGCACCGTCTCAAACTCAT
TTAAGCAGTGGAGACTTGTTAAGTCAGAATTGGTTCTCTGGAGATAATCATGCCCGTGGG
GCCTGGTCTACTTTGGAAGGTATTGGTGGTCCATCTCAGAGCATTGGAAGTGTAAACAAC
TCAGATCAGAGCTTGTACAGTGTTTTATCTGAATGTAACACACTGCATCAGAGTGGCTCT
TATGATCTATCAGGATCAAGAGAACGGTTGATCCCTTCAAGGAACTATGGTGAGATGGGT
GTGGGAGTTACCACAACGAGCAATGCCTCGCTGCAACCAGCTAAACCCCTTAGTTACATG
AGTAGCCAGGAAAGTCCTGGAGGCCTTAAACCCAATGGTCTCGGATGGGTGAGCATGTCT
ACTCAAAGTCCTGGGGTACAGGATCCGATGGGTAAACCATTCTTGAGGTCCTGGAATCCG
TAG

Peptide Sequence

PEP ID

XP_016510229.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827579 isoform X3 [Nicotiana tabacum]
Sequence

MVADQWKKRLRAASTVDYSQEPHGLKKKKKKQGLARYSLKLRSNVSLVWDDKKRCVLAKK
EQIGISWRDLTPFLDSLSHHHSILADVFTLPHGIFEFENLSEVLSHEVWQANLSEDERGF
LTQFLPEGSDPDEIVCKLLGQENFHFGNPFVKWGQMICSGSFHPDIVMRQEHLLKANKKA
YYMELQNYHNNMIEKLQLWKENVESCKDSEEELVERILRKGFTEGTYGSSPDGAKVIGRS
RKGEKLNRRNIQHSDGAKYMSYIKVSREHYQRVKNSMKHNSNSIQPRSLSNVLGDMENLH
VQPFEFYEEEERQKLHDHWLHLANRDVPAGFANWIQRRSQGLQVRRSLGQEMEQKLKVQI
KGEEEKIPDGIFAELTDTKEEEERRSSDGIFAELTDNKEAEVALSMEVEVDQQEGNEKSD
GLIEKQMESEIVDNELSLHSEVDQHESNEKSDGLIEKQMESEIVNTELFLHSEVDQHESN
EKSDGLIEKQMESEIVNTELFLHSEVDQHEGKEESDGLIKKQMEREIVNDELPLQPEDQE
GGESASLCDKQTPDSTANTDYDDESLPVSLNQHLDHVSLVESNQLDHFKLDSNENHIIQQ
ADEVSPTLSEYPEEGLNNVDGPVDQGDPLASTSVGWPAVSIATSYGRATPISHEYSSVEE
LSLGHPRVTDEPAASLINLGAVPTEKDAGRDMLPREPSDVSLFGSYPQNRNEIFQPFFKG
PDSLSYNHEHRQPPLVYQPSSNLIVEPGQYSGHLREQLHAQLPLELRHKGLNDLLMHQNF
QENLYPDGGRYSFPRHEQLNVGMQDWAVNSVHVSAPSQTHLSSGDLLSQNWFSGDNHARG
AWSTLEGIGGPSQSIGSVNNSDQSLYSVLSECNTLHQSGSYDLSGSRERLIPSRNYGEMG
VGVTTTSNASLQPAKPLSYMSSQESPGGLKPNGLGWVSMSTQSPGVQDPMGKPFLRSWNP

Transcript Sequence

Gene sequence data has not been registered.